Other Links - CALDWELL LAB - WORMSHACK

Links

Department of Biological Sciences

The University of Alabama

Journal of Science and Health at UA
(JOSHUA)

PubMed

Google Scholar

Lister Hill Library (UAB)

Rogers Library (UA)

C. elegans Resources

Textpresso - C. elegans literature search tool
OrthoList 2 - comparative genomic database on human vs. worm genes
C. elegans Information Server — An excellent starting point for worm exploration.
C. elegans Labs — A listing of individual C. elegans labs
CGC Server — Strain lists and literature database for C. elegans located at the University of Minnesota
Wormbase — The main C. elegans database. Includes the genetic map, physical map, strain, phenotype and gene info
WormAtlas - Online database for the complete anatomy and neuroconnectivity of C. elegans
C. elegans Gene Classes
Sanger Centre C. elegans BLAST Server — C. elegans genome and EST BLAST server
TargetScanWorm - C. elegans miRNA database tool

Genomics Databases

DNA, RNA, and Protein Analysis

SNPs3D
Genic Intolerance (Columbia U)
denovo db
gnomad (Broad Institute)
TargetScanWorm - C. elegans miRNA database tool
Tools4miRs (an aggregate microRNA database site)
miRToolsGallery (an aggregate microRNA database site)
miRbase
miRDB
deepBase v. 2.0 (database tool for deep seq datasets)

Gene Finder
Webcutter (restriction enzyme program)
NEBcutter (restriction enzyme program)
The Human Genome Project
The Sanger Centre — Human, nematode, yeast, and bacterial genome sequencing
Nature Genome Gateway
Genetics Home Reference

Other Model Organisms

FlyBase — Drosophila database
ZFIN — Zebrafish database
Yeast — S. cerevisiae, S. pombe, C. albicans databases
Arabinet - Arabidopsis database
S. cerevisiae BLAST and FASTA Servers
Drosophila BLAST Servers
Arabidopsis BLAST and FASTA Servers

Journals